Transcript: lnc-ZNF569-6:2

Basic information

LNCipedia transcript ID: lnc-ZNF569-6:2 
LNCipedia gene ID: lnc-ZNF569-6
Ensembl Gene ID: ENSG00000276846
Ensembl Transcript ID: ENST00000611171
Location (hg38): chr19:37314868-37315620
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 753 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611171.1
Alternative gene names: ENSG00000276846.1; CTD-3220F14.3; AC016590.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.1978 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF569-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF569-6:2
4.1 lnc-ZNF569-6:2
5.0 lnc-ZNF569-6:2
5.1 lnc-ZFP30-12:3
5.2 lnc-ZNF569-6:2