Transcript: lnc-ZNF571-1:5

Basic information

LNCipedia transcript ID: lnc-ZNF571-1:5 
LNCipedia gene ID: lnc-ZNF571-1
Location (hg38): chr19:37547828-37551069
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2547 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027356; NONHSAT066129
Alternative gene names: XLOC_013333; linc-ZNF569-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 58.1431 non-coding 
CPAT coding probability 99.10% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF571-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC022148.1-1:1
3.1 lnc-AC022148.1-1:1
4.0 lnc-AC022148.1-1:1
4.1 lnc-AC022148.1-1:1
5.0 lnc-AC022148.1-1:1
5.1 lnc-ZFP30-4:4
5.2 lnc-ZNF571-1:5