Transcript: lnc-ZNF574-1:3

Basic information

LNCipedia transcript ID: lnc-ZNF574-1:3 
LNCipedia gene ID: lnc-ZNF574-1
RefSeq ID: NR_038332
Location (hg38): chr19:42132629-42137099
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 685 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038332; NR_038332.1
Alternative gene names: LOC100505622


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.0056 non-coding 
CPAT coding probability 4.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF574-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF574-1:3
4.0 lnc-ZNF574-1:3
4.1 lnc-ZNF574-1:3
5.0 lnc-ZNF574-1:3
5.1 lnc-SHKBP1-37:7
5.2 lnc-ZNF574-1:3

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