Transcript: lnc-ZNF582-6:5

Basic information

LNCipedia transcript ID: lnc-ZNF582-6:5 
LNCipedia gene ID: lnc-ZNF582-6
Ensembl Gene ID: ENSG00000267429
Ensembl Transcript ID: ENST00000593258
Location (hg38): chr19:56347081-56348183
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1103 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068107; ENST00000593258.1
Alternative gene names: ENSG00000267429.1; AC006116.15; AC006116.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.9331 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF582-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZSCAN5A-3:5
4.0 lnc-ZNF582-6:5
4.1 lnc-ZNF582-6:5
5.0 lnc-ZNF582-6:5
5.1 lnc-NLRP9-22:8
5.2 lnc-ZNF582-6:5