Transcript: lnc-ZNF585B-5:4

Basic information

LNCipedia transcript ID: lnc-ZNF585B-5:4 
LNCipedia gene ID: lnc-ZNF585B-5
Ensembl Gene ID: ENSG00000267605
Ensembl Transcript ID: ENST00000590889
Location (hg38): chr19:37265947-37268984
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 547 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066092; ENST00000590889.1; ENST00000590889.5
Alternative gene names: ENSG00000267605.1; CTD-3220F14.1; ENSG00000267605.5; AC016590.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.6056 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF585B-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF585B-5:4
4.0 lnc-ZNF585B-5:4
4.1 lnc-ZNF585B-5:4
5.0 lnc-ZNF585B-5:4
5.1 lnc-ZFP30-13:4
5.2 lnc-ZNF585B-5:4