Transcript: lnc-ZNF608-10:1

Basic information

LNCipedia transcript ID: lnc-ZNF608-10:1 
LNCipedia gene ID: lnc-ZNF608-10
Location (hg38): chr5:125370165-125370924
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 760 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000502275; ENST00000502275.1; RP11-395P13.3-001; OTTHUMT00000371326.1; NONHSAT103556
Alternative gene names: ENSG00000249677; RP11-395P13.3; ENSG00000249677.1; OTTHUMG00000163009.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -160.2904 non-coding 
CPAT coding probability 3.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF608-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF608-10:1
3.1 lnc-ZNF608-10:1
4.0 lnc-ZNF608-10:1
4.1 lnc-ZNF608-10:1
5.0 lnc-ZNF608-10:1
5.1 lnc-LOX-46:1
5.2 lnc-ZNF608-10:1