Transcript: lnc-ZNF608-12:1

Basic information

LNCipedia transcript ID: lnc-ZNF608-12:1 
LNCipedia gene ID: lnc-ZNF608-12
Location (hg38): chr5:125395379-125395980
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 602 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000509010; ENST00000509010.1; RP11-395P13.6-001; OTTHUMT00000372370.1; NONHSAT103559
Alternative gene names: ENSG00000251554; RP11-395P13.6; ENSG00000251554.1; OTTHUMG00000163261.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.5238 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF608-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF608-12:1
3.1 lnc-ZNF608-12:1
4.0 lnc-ZNF608-12:1
4.1 lnc-ZNF608-12:1
5.0 lnc-ZNF608-12:1
5.1 lnc-LOX-50:1
5.2 lnc-ZNF608-12:1