Transcript: lnc-ZNF608-13:1

Basic information

LNCipedia transcript ID: lnc-ZNF608-13:1 
LNCipedia gene ID: lnc-ZNF608-13
Location (hg38): chr5:124808828-124809233
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 406 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT103536
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
SAHLQWMVVR 100% sense-3
Lee translation initiation sites 0 non-coding 
PhyloCSF score 155.6919 coding 
CPAT coding probability 44.73% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF608-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF608-13:1
4.0 lnc-ZNF608-13:1
4.1 lnc-ZNF608-13:1
5.0 lnc-ZNF608-13:1
5.1 lnc-LOX-33:1
5.2 lnc-ZNF608-13:1