Transcript: lnc-ZNF608-9:1

Basic information

LNCipedia transcript ID: lnc-ZNF608-9:1 
LNCipedia gene ID: lnc-ZNF608-9
Location (hg38): chr5:125368763-125369342
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 580 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000511994; ENST00000511994.1; RP11-395P13.1-001; OTTHUMT00000371329.1; NONHSAT103555
Alternative gene names: ENSG00000248147; RP11-395P13.1; ENSG00000248147.1; OTTHUMG00000163012.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.1062 non-coding 
CPAT coding probability 2.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF608-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF608-9:1
3.1 lnc-ZNF608-9:1
4.0 lnc-ZNF608-9:1
4.1 lnc-ZNF608-9:1
5.0 lnc-ZNF608-9:1
5.1 lnc-LOX-45:1
5.2 lnc-ZNF608-9:1