Transcript: lnc-ZNF624-6:1

Basic information

LNCipedia transcript ID: lnc-ZNF624-6:1 
LNCipedia gene ID: lnc-ZNF624-6
Ensembl Gene ID: ENSG00000264673
Ensembl Transcript ID: ENST00000578710
Location (hg38): chr17:16788248-16789234
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 686 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000578710.1; RP11-92B11.3-001; OTTHUMT00000444123.1; NONHSAT146005
Alternative gene names: ENSG00000264673.1; RP11-92B11.3; OTTHUMG00000178962.1; AC098850.2; AC098850.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.7184 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF624-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRT17P1-1:1
4.0 lnc-KRT17P1-1:1
4.1 lnc-KRT17P1-1:1
5.0 lnc-KRT17P1-1:1
5.1 lnc-COPS3-22:1
5.2 lnc-ZNF624-6:1