Transcript: lnc-ZNF627-2:4

Basic information

LNCipedia transcript ID: lnc-ZNF627-2:4 
LNCipedia gene ID: lnc-ZNF627-2
Location (hg38): chr19:11682541-11686259
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1516 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT061185; ENST00000542716.1
Alternative gene names: ENSG00000197332.7; ZNF833P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.1502 non-coding 
CPAT coding probability 98.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF627-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF627-2:4
4.0 lnc-ZNF627-2:4
4.1 lnc-ZNF627-2:4
5.0 lnc-ZNF627-2:4
5.1 lnc-ZNF441-2:15
5.2 lnc-ZNF627-2:4