Transcript: lnc-ZNF627-2:7

Basic information

LNCipedia transcript ID: lnc-ZNF627-2:7 
LNCipedia gene ID: lnc-ZNF627-2
Ensembl Gene ID: ENSG00000197332
Ensembl Transcript ID: ENST00000344893
Location (hg38): chr19:11639776-11686569
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3383 bp
Exons: 10
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000344893.4
Alternative gene names: ENSG00000197332.8; CTC-499B15.5; AC008543.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.8635 non-coding 
CPAT coding probability 97.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF627-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF627-2:7
4.1 lnc-ZNF627-2:7
5.0 lnc-ZNF627-2:7
5.1 lnc-ZNF441-2:2
5.2 lnc-ZNF627-2:7