Transcript: lnc-ZNF644-1:26

Basic information

LNCipedia transcript ID: lnc-ZNF644-1:26 
LNCipedia gene ID: lnc-ZNF644-1
Ensembl Gene ID: ENSG00000233593
Ensembl Transcript ID: ENST00000636917
Location (hg38): chr1:90831874-90834689
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 627 bp
Exons: 2
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636917.1
Alternative gene names: ENSG00000233593.8; RP4-665J23.1; AL590094.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -87.4055 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF644-1:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF644-1:26
5.0 lnc-ZNF644-1:26
5.1 lnc-ZNF644-1:26
5.2 lnc-ZNF644-1:26