Transcript: lnc-ZNF644-1:7

Basic information

LNCipedia transcript ID: lnc-ZNF644-1:7 
LNCipedia gene ID: lnc-ZNF644-1
Location (hg38): chr1:90782538-90835857
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1275 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001579; NONHSAT004405
Alternative gene names: XLOC_000915; linc-BARHL2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.181 non-coding 
CPAT coding probability 10.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF644-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF644-1:7
3.1 lnc-ZNF644-1:7
4.0 lnc-ZNF644-1:7
4.1 lnc-ZNF644-1:7
5.0 lnc-ZNF644-1:7
5.1 lnc-ZNF644-1:7
5.2 lnc-ZNF644-1:7