Transcript: lnc-ZNF654-3:1

Basic information

LNCipedia transcript ID: lnc-ZNF654-3:1 
LNCipedia gene ID: lnc-ZNF654-3
Location (hg38): chr3:88161434-88167095
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5662 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT090702; FPKM1_group_21550_transcript_7
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.5194 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF654-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf38-3:1
4.0 lnc-C3orf38-3:1
4.1 lnc-C3orf38-3:1
5.0 lnc-C3orf38-3:1
5.1 lnc-ZNF654-4:1
5.2 lnc-ZNF654-3:1