Transcript: lnc-ZNF680-4:9

Basic information

LNCipedia transcript ID: lnc-ZNF680-4:9 
LNCipedia gene ID: lnc-ZNF680-4
Ensembl Gene ID: ENSG00000236299
Ensembl Transcript ID: ENST00000600182
Location (hg38): chr7:63898879-63900794
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 787 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000600182.2
Alternative gene names: ENSG00000236299.7; RP11-340I6.7; AC092634.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.7719 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF680-4:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF680-4:9
4.1 lnc-ZNF680-4:9
5.0 lnc-ZNF680-4:9
5.1 lnc-PSPH-56:1
5.2 lnc-ZNF680-4:9