Transcript: lnc-ZNF705D-2:27

Basic information

LNCipedia transcript ID: lnc-ZNF705D-2:27 
LNCipedia gene ID: lnc-ZNF705D-2
Location (hg38): chr8:12116190-12177495
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 651 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT125117
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.1095 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF705D-2:27 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med
  2. Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF705D-2:8
4.0 lnc-AC130352.1-2:9
4.1 lnc-AC130352.1-2:9
5.0 lnc-AC130352.1-2:9
5.1 lnc-DEFB106A-82:8
5.2 lnc-ZNF705D-2:27