Transcript: lnc-ZNF705D-2:44

Basic information

LNCipedia transcript ID: lnc-ZNF705D-2:44 
LNCipedia gene ID: lnc-ZNF705D-2
RefSeq ID: NR_026789
Location (hg38): chr8:12362019-12411001
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 775 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026789; NR_026789.1
Alternative gene names: FAM66A

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 130.4645 coding 
CPAT coding probability 70.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF705D-2:44 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med
  2. Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF705D-2:11
4.0 lnc-AC130352.1-2:20
4.1 lnc-AC130352.1-2:20
5.0 lnc-AC130352.1-2:20
5.1 lnc-DEFB106A-82:25
5.2 lnc-ZNF705D-2:44