Transcript: lnc-ZNF705D-4:2

Basic information

LNCipedia transcript ID: lnc-ZNF705D-4:2 
LNCipedia gene ID: lnc-ZNF705D-4
Ensembl Gene ID: ENSG00000270074
Ensembl Transcript ID: ENST00000602981
Location (hg38): chr8:12412827-12414373
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1547 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT125141; ENST00000602981.1
Alternative gene names: ENSG00000270074.1; LINC00965; RP11-351I21.11; AC087203.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.2174 non-coding 
CPAT coding probability 9.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF705D-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC130352.1-4:1
4.0 lnc-AC130352.1-4:1
4.1 lnc-AC130352.1-4:1
5.0 lnc-AC130352.1-4:1
5.1 lnc-DEFB106A-77:1
5.2 lnc-ZNF705D-4:2