Transcript: lnc-ZNF705E-1:17

Basic information

LNCipedia transcript ID: lnc-ZNF705E-1:17 
LNCipedia gene ID: lnc-ZNF705E-1
Ensembl Gene ID: ENSG00000248671
Ensembl Transcript ID: ENST00000524714
Location (hg38): chr11:71795962-71813446
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 447 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000524714.1; CTD-2313N18.5-003; OTTHUMT00000394763.1
Alternative gene names: ENSG00000248671.2; CTD-2313N18.5; OTTHUMG00000167480.1; ENSG00000248671.3; ENSG00000248671.7; ALG1L9P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 94.4742 coding 
CPAT coding probability 5.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF705E-1:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-849H4.2.1-1:3
4.0 lnc-RP11-849H4.2.1-1:3
4.1 lnc-RP11-849H4.2.1-1:3
5.0 lnc-RP11-849H4.2.1-1:3
5.1 lnc-UCP3-62:17
5.2 lnc-ZNF705E-1:17