Transcript: lnc-ZNF705E-1:19

Basic information

LNCipedia transcript ID: lnc-ZNF705E-1:19 
LNCipedia gene ID: lnc-ZNF705E-1
Location (hg38): chr11:71800541-71804640
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 549 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000532875
Alternative gene names: ENSG00000254978


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 334.2843 coding 
CPAT coding probability 63.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF705E-1:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-849H4.2.1-1:2
3.1 lnc-RP11-849H4.2.1-1:5
4.0 lnc-RP11-849H4.2.1-1:5
4.1 lnc-RP11-849H4.2.1-1:5
5.0 lnc-RP11-849H4.2.1-1:5
5.1 lnc-UCP3-62:19
5.2 lnc-ZNF705E-1:19