Transcript: lnc-ZNF716-52:2

Basic information

LNCipedia transcript ID: lnc-ZNF716-52:2 
LNCipedia gene ID: lnc-ZNF716-52
Ensembl Gene ID: ENSG00000260653
Ensembl Transcript ID: ENST00000561575
Location (hg38): chr7:57404771-57416203
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1881 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000561575.5
Alternative gene names: ENSG00000260653.5; RP11-114G11.5; AC237221.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 10.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF716-52:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CCT6A-52:2
5.1 lnc-CCT6A-52:2
5.2 lnc-ZNF716-52:2