Transcript: lnc-ZNF726-1:4

Basic information

LNCipedia transcript ID: lnc-ZNF726-1:4 
LNCipedia gene ID: lnc-ZNF726-1
Ensembl Gene ID: ENSG00000268362
Ensembl Transcript ID: ENST00000597683
Location (hg38): chr19:24033449-24066688
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1966 bp
Exons: 7
Sources: Biogazelle lncRNA chip; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000515501; NONHSAT063952; ENST00000597683.1
Alternative gene names: ENSG00000249648; ENSG00000268362.1; CTD-2017D11.1; ENSG00000268362.5; AC092279.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 20.8109 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF726-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF254-1:2
3.1 lnc-ZNF254-1:2
4.0 lnc-ZNF254-1:2
4.1 lnc-ZNF254-1:2
5.0 lnc-ZNF254-1:2
5.1 lnc-ZNF429-60:3
5.2 lnc-ZNF726-1:4