Transcript: lnc-ZNF727-18:3

Basic information

LNCipedia transcript ID: lnc-ZNF727-18:3 
LNCipedia gene ID: lnc-ZNF727-18
Location (hg38): chr7:63349070-63351773
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 654 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00012850
Alternative gene names: XLOC_006115; linc-ZNF727-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.9471 non-coding 
CPAT coding probability 4.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF727-18:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC006455.1-1:1
3.1 lnc-AC006455.1-1:1
4.0 lnc-AC006455.1-1:1
4.1 lnc-AC006455.1-1:1
5.0 lnc-AC006455.1-1:1
5.1 lnc-TPST1-87:3
5.2 lnc-ZNF727-18:3