Transcript: lnc-ZNF727-18:4

Basic information

LNCipedia transcript ID: lnc-ZNF727-18:4 
LNCipedia gene ID: lnc-ZNF727-18
RefSeq ID: NR_028348
Location (hg38): chr7:63349070-63351774
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 655 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT120903; NR_028348; NR_028349; NR_028348.1
Alternative gene names: LOC100287704


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.9471 non-coding 
CPAT coding probability 4.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF727-18:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006455.1-1:2
4.0 lnc-AC006455.1-1:2
4.1 lnc-AC006455.1-1:2
5.0 lnc-AC006455.1-1:2
5.1 lnc-TPST1-87:4
5.2 lnc-ZNF727-18:4