Transcript: lnc-ZNF728-1:1

Basic information

LNCipedia transcript ID: lnc-ZNF728-1:1 
LNCipedia gene ID: lnc-ZNF728-1
Ensembl Gene ID: ENSG00000268296
Ensembl Transcript ID: ENST00000600673
Location (hg38): chr19:22907086-22914289
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 383 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT063830; ENST00000600673.1
Alternative gene names: ENSG00000268296.1; CTD-2579N5.3; AC022145.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.5426 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF728-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF99-1:2
4.0 lnc-ZNF99-1:2
4.1 lnc-ZNF99-1:2
5.0 lnc-ZNF99-1:2
5.1 lnc-PALM3-229:1
5.2 lnc-ZNF728-1:1