Transcript: lnc-ZNF728-1:2

Basic information

LNCipedia transcript ID: lnc-ZNF728-1:2 
LNCipedia gene ID: lnc-ZNF728-1
Location (hg38): chr19:22903996-22914254
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 337 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027231; NONHSAT063829
Alternative gene names: XLOC_013270; linc-ZNF99-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.2887 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF728-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF99-1:1
3.1 lnc-ZNF99-1:1
4.0 lnc-ZNF99-1:1
4.1 lnc-ZNF99-1:1
5.0 lnc-ZNF99-1:1
5.1 lnc-PALM3-229:2
5.2 lnc-ZNF728-1:2