Transcript: lnc-ZNF778-1:5

Basic information

LNCipedia transcript ID: lnc-ZNF778-1:5 
LNCipedia gene ID: lnc-ZNF778-1
RefSeq ID: NR_136339
Location (hg38): chr16:89296128-89298317
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1576 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136339.1
Alternative gene names: LOC105371414


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -50.2595 non-coding 
CPAT coding probability 6.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF778-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SPG7-13:3
5.1 lnc-SPG7-13:3
5.2 lnc-ZNF778-1:5