Transcript: lnc-ZNF780B-3:1

Basic information

LNCipedia transcript ID: lnc-ZNF780B-3:1 
LNCipedia gene ID: lnc-ZNF780B-3
Location (hg38): chr19:40040897-40090934
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 7801 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269749.1|ENCT00000214831.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 103.2303 coding 
CPAT coding probability 82.20% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF780B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF780A-1:3
5.0 lnc-ZNF780A-1:3
5.1 lnc-PRX-16:1
5.2 lnc-ZNF780B-3:1