Transcript: lnc-ZNF780B-3:5

Basic information

LNCipedia transcript ID: lnc-ZNF780B-3:5 
LNCipedia gene ID: lnc-ZNF780B-3
Location (hg38): chr19:40031210-40090913
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4960 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269749.1|FTMT27300006400.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.3326 non-coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF780B-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF780A-1:6
5.0 lnc-ZNF780A-1:6
5.1 lnc-PRX-16:5
5.2 lnc-ZNF780B-3:5