Transcript: lnc-ZNF792-1:3

Basic information

LNCipedia transcript ID: lnc-ZNF792-1:3 
LNCipedia gene ID: lnc-ZNF792-1
Location (hg38): chr19:34900912-34905099
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 416 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027314; NONHSAT065649
Alternative gene names: XLOC_013310; linc-ZNF599-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.8991 non-coding 
CPAT coding probability 2.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF792-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF792-1:3
3.1 lnc-ZNF792-1:3
4.0 lnc-ZNF792-1:3
4.1 lnc-ZNF792-1:3
5.0 lnc-ZNF792-1:3
5.1 lnc-SCGB2B2-17:6
5.2 lnc-ZNF792-1:3