Transcript: lnc-ZNF792-1:9

Basic information

LNCipedia transcript ID: lnc-ZNF792-1:9 
LNCipedia gene ID: lnc-ZNF792-1
Ensembl Gene ID: ENSG00000270544
Ensembl Transcript ID: ENST00000603717
Location (hg38): chr19:34902202-34904195
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 442 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT065652; ENST00000603717.1
Alternative gene names: ENSG00000270544.1; CTC-523E23.14; AC008555.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.9819 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF792-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF792-1:9
4.0 lnc-ZNF792-1:9
4.1 lnc-ZNF792-1:9
5.0 lnc-ZNF792-1:9
5.1 lnc-SCGB2B2-17:9
5.2 lnc-ZNF792-1:9