Transcript: lnc-ZNF8-4:3

Basic information

LNCipedia transcript ID: lnc-ZNF8-4:3 
LNCipedia gene ID: lnc-ZNF8-4
Location (hg38): chr19:58305377-58306634
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 616 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000434052; ENST00000434052.1; ERVK3-1-003; OTTHUMT00000317864.1; NONHSAT068350
Alternative gene names: ENSG00000142396; AC020915.4; ENSG00000142396.4; ERVK3-1; OTTHUMG00000150367.1; ENSG00000142396.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.006 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF8-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF8-4:3
3.1 lnc-ZNF8-4:3
4.0 lnc-ZNF8-4:3
4.1 lnc-ZNF8-4:3
5.0 lnc-ZNF8-4:3
5.1 lnc-ZNF587B-37:5
5.2 lnc-ZNF8-4:3