Transcript: lnc-ZNF800-5:1

Basic information

LNCipedia transcript ID: lnc-ZNF800-5:1 
LNCipedia gene ID: lnc-ZNF800-5
Location (hg38): chr7:127138448-127138801
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 354 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr7_8972_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.5237 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF800-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF800-5:1
4.0 lnc-ZNF800-5:1
4.1 lnc-ZNF800-5:1
5.0 lnc-ZNF800-5:1
5.1 lnc-UBE2H-37:1
5.2 lnc-ZNF800-5:1