Transcript: lnc-ZNF804B-1:1

Basic information

LNCipedia transcript ID: lnc-ZNF804B-1:1 
LNCipedia gene ID: lnc-ZNF804B-1
Ensembl Gene ID: ENSG00000233420
Ensembl Transcript ID: ENST00000444032
Location (hg38): chr7:88710631-88756725
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 792 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000444032.1; AC002127.4-001; OTTHUMT00000332864.1; NONHSAT121877
Alternative gene names: ENSG00000233420.1; AC002127.4; OTTHUMG00000153893.1; AC002127.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.6257 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF804B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF804B-1:1
4.0 lnc-ZNF804B-1:1
4.1 lnc-ZNF804B-1:1
5.0 lnc-ZNF804B-1:1
5.1 lnc-LAMTOR4-135:1
5.2 lnc-ZNF804B-1:1