Transcript: lnc-ZNF823-2:1

Basic information

LNCipedia transcript ID: lnc-ZNF823-2:1 
LNCipedia gene ID: lnc-ZNF823-2
Ensembl Gene ID: ENSG00000267646
Ensembl Transcript ID: ENST00000589227
Location (hg38): chr19:11796084-11798598
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2515 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT061191; ENST00000589227.1
Alternative gene names: ENSG00000267646.1; CTC-499B15.7; AC008543.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.3331 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF823-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF823-2:1
4.0 lnc-ZNF823-2:1
4.1 lnc-ZNF823-2:1
5.0 lnc-ZNF823-2:1
5.1 lnc-ZNF823-2:1
5.2 lnc-ZNF823-2:1