Transcript: lnc-ZNF836-1:2

Basic information

LNCipedia transcript ID: lnc-ZNF836-1:2 
LNCipedia gene ID: lnc-ZNF836-1
Ensembl Gene ID: ENSG00000267827
Ensembl Transcript ID: ENST00000598982
Location (hg38): chr19:52130548-52171469
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 535 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT067516; ENST00000598982.1; ENST00000598982.5
Alternative gene names: ENSG00000267827.1; CTC-471J1.8; ENSG00000267827.5; AC011468.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 52.896 non-coding 
CPAT coding probability 25.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF836-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF836-1:2
4.0 lnc-ZNF836-1:2
4.1 lnc-ZNF836-1:2
5.0 lnc-ZNF836-1:2
5.1 lnc-FAM71E1-63:7
5.2 lnc-ZNF836-1:2