Transcript: lnc-ZNF836-4:1

Basic information

LNCipedia transcript ID: lnc-ZNF836-4:1 
LNCipedia gene ID: lnc-ZNF836-4
Ensembl Gene ID: ENSG00000269535
Ensembl Transcript ID: ENST00000594379
Location (hg38): chr19:52300693-52345229
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1905 bp
Exons: 7
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT067535; ENST00000594379.1
Alternative gene names: ENSG00000269535.1; CTD-2525I3.6; AC010320.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.0722 non-coding 
CPAT coding probability 4.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF836-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF836-4:1
4.0 lnc-ZNF836-4:1
4.1 lnc-ZNF836-4:1
5.0 lnc-ZNF836-4:1
5.1 lnc-TMC4-65:1
5.2 lnc-ZNF836-4:1