Transcript: lnc-ZNF891-2:2

Basic information

LNCipedia transcript ID: lnc-ZNF891-2:2 
LNCipedia gene ID: lnc-ZNF891-2
Ensembl Gene ID: ENSG00000246394
Ensembl Transcript ID: ENST00000443154
RefSeq ID: NR_110091
Location (hg38): chr12:133032659-133037222
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1151 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000443154; ENST00000443154.3; RP11-386I8.6-001; OTTHUMT00000397148.1; NONHSAT032164; NR_110091; NR_110091.1
Alternative gene names: ENSG00000246394; RP11-386I8.6; ENSG00000246394.2; OTTHUMG00000167937.1; ENSG00000246394.3; ENSG00000246394.7; AC073911.1; LOC101928597


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.6609 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF891-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF605-1:2
3.1 lnc-ZNF605-1:2
4.0 lnc-ZNF605-1:2
4.1 lnc-ZNF605-1:2
5.0 lnc-ZNF605-1:2
5.1 lnc-ANKLE2-13:2
5.2 lnc-ZNF891-2:2