Transcript: lnc-ZNHIT6-1:4

Basic information

LNCipedia transcript ID: lnc-ZNHIT6-1:4 
LNCipedia gene ID: lnc-ZNHIT6-1
Ensembl Gene ID: ENSG00000282057
Ensembl Transcript ID: ENST00000472448
Location (hg38): chr1:85495431-85521810
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 517 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT004251; ENST00000472448.1
Alternative gene names: ENSG00000282057.1; RP4-621F18.2; AC092807.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -366.6305 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNHIT6-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNHIT6-1:4
4.0 lnc-ZNHIT6-1:4
4.1 lnc-ZNHIT6-1:4
5.0 lnc-ZNHIT6-1:4
5.1 lnc-RBMXL1-36:5
5.2 lnc-ZNHIT6-1:4