Transcript: lnc-ZPBP-2:3

Basic information

LNCipedia transcript ID: lnc-ZPBP-2:3 
LNCipedia gene ID: lnc-ZPBP-2
Ensembl Gene ID: ENSG00000231681
Ensembl Transcript ID: ENST00000639870
Location (hg38): chr7:50202001-50262994
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1370 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000639870.1
Alternative gene names: ENSG00000231681.2; AC020743.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -102.0475 non-coding 
CPAT coding probability 9.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZPBP-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TNS3-35:1
5.1 lnc-TNS3-35:1
5.2 lnc-ZPBP-2:3