Transcript: lnc-ZPLD1-2:1

Basic information

LNCipedia transcript ID: lnc-ZPLD1-2:1 
LNCipedia gene ID: lnc-ZPLD1-2
Location (hg38): chr3:102917407-103152437
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 736 bp
Exons: 7
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006923; NONHSAT090937
Alternative gene names: XLOC_002743; linc-ALCAM-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.1185 non-coding 
CPAT coding probability 29.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZPLD1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZPLD1-2:1
3.1 lnc-ZPLD1-2:1
4.0 lnc-ZPLD1-2:1
4.1 lnc-ZPLD1-2:1
5.0 lnc-ZPLD1-2:1
5.1 lnc-TMEM45A-26:1
5.2 lnc-ZPLD1-2:1