Transcript: lnc-ZPR1-1:2

Basic information

LNCipedia transcript ID: lnc-ZPR1-1:2 
LNCipedia gene ID: lnc-ZPR1-1
Location (hg38): chr11:116773799-116775260
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1462 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT024353
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.7298 non-coding 
CPAT coding probability 5.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZPR1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF259-1:2
4.0 lnc-BUD13-1:3
4.1 lnc-BUD13-1:3
5.0 lnc-BUD13-1:3
5.1 lnc-SCN4B-43:2
5.2 lnc-ZPR1-1:2