Transcript: lnc-ZSCAN10-1:6

Basic information

LNCipedia transcript ID: lnc-ZSCAN10-1:6 
LNCipedia gene ID: lnc-ZSCAN10-1
Location (hg38): chr16:3076911-3087109
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1216 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262370.1|ENST00000571404.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 73.7166 coding 
CPAT coding probability 8.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZSCAN10-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZSCAN10-1:6
5.0 lnc-ZSCAN10-1:6
5.1 lnc-PKMYT1-15:2
5.2 lnc-ZSCAN10-1:6