Transcript: lnc-ZSCAN10-4:3

Basic information

LNCipedia transcript ID: lnc-ZSCAN10-4:3 
LNCipedia gene ID: lnc-ZSCAN10-4
Location (hg38): chr16:3152176-3158742
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6377 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261889.1|ENCT00000163002.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 138.4946 coding 
CPAT coding probability 19.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZSCAN10-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZSCAN10-4:3
5.0 lnc-ZSCAN10-4:3
5.1 lnc-PKMYT1-23:1
5.2 lnc-ZSCAN10-4:3