Transcript: lnc-ZSCAN10-7:1

Basic information

LNCipedia transcript ID: lnc-ZSCAN10-7:1 
LNCipedia gene ID: lnc-ZSCAN10-7
Location (hg38): chr16:3140922-3150540
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 9619 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000263072.1|ENCT00000163001.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 149.0555 coding 
CPAT coding probability 41.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZSCAN10-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZSCAN10-7:1
5.0 lnc-ZSCAN10-7:1
5.1 lnc-PKMYT1-22:1
5.2 lnc-ZSCAN10-7:1