Transcript: lnc-ZSCAN2-6:3

Basic information

LNCipedia transcript ID: lnc-ZSCAN2-6:3 
LNCipedia gene ID: lnc-ZSCAN2-6
RefSeq ID: NR_038274
Location (hg38): chr15:84570649-84580181
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2680 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT047981; NR_038274; NR_038274.1
Alternative gene names: LINC00933


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.3685 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSCAN2-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZSCAN2-6:3
4.0 lnc-ZSCAN2-6:3
4.1 lnc-ZSCAN2-6:3
5.0 lnc-ZSCAN2-6:3
5.1 lnc-UBE2Q2L-12:3
5.2 lnc-ZSCAN2-6:3