Transcript: lnc-ZSCAN5A-3:6

Basic information

LNCipedia transcript ID: lnc-ZSCAN5A-3:6 
LNCipedia gene ID: lnc-ZSCAN5A-3
Location (hg38): chr19:56377037-56377792
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 756 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT068123
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -237.5112 non-coding 
CPAT coding probability 23.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSCAN5A-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF582-3:1
4.0 lnc-ZNF582-3:1
4.1 lnc-ZNF582-3:1
5.0 lnc-ZNF582-3:1
5.1 lnc-NLRP9-23:1
5.2 lnc-ZSCAN5A-3:6