Transcript: lnc-ZSCAN5A-3:7

Basic information

LNCipedia transcript ID: lnc-ZSCAN5A-3:7 
LNCipedia gene ID: lnc-ZSCAN5A-3
Ensembl Gene ID: ENSG00000267776
Ensembl Transcript ID: ENST00000591836
Location (hg38): chr19:56376704-56377284
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 581 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068122; ENST00000591836.1
Alternative gene names: ENSG00000267776.1; AC006116.24; AC006116.10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.9076 non-coding 
CPAT coding probability 3.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSCAN5A-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF582-3:2
4.0 lnc-ZNF582-3:2
4.1 lnc-ZNF582-3:2
5.0 lnc-ZNF582-3:2
5.1 lnc-NLRP9-23:2
5.2 lnc-ZSCAN5A-3:7