Transcript: lnc-ZSWIM2-2:2

Basic information

LNCipedia transcript ID: lnc-ZSWIM2-2:2 
LNCipedia gene ID: lnc-ZSWIM2-2
Ensembl Gene ID: ENSG00000259915
Ensembl Transcript ID: ENST00000564407
Location (hg38): chr2:186354570-186356773
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2204 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT075989; ENST00000564407.2
Alternative gene names: ENSG00000259915.2; RP11-410E4.1; AC017071.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.8556 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSWIM2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZSWIM2-2:2
4.0 lnc-ZSWIM2-2:2
4.1 lnc-ZSWIM2-2:2
5.0 lnc-ZSWIM2-2:2
5.1 lnc-CALCRL-5:2
5.2 lnc-ZSWIM2-2:2